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Solyc09g061430.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g061430.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g061430.2.1Uncharacterized protein; Putative nuclear GTPase (609 aa)    
Predicted Functional Partners:
101257580
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (603 aa)
     
 
  0.993
101257709
Ribosomal protein S8e family protein (260 aa)
     
 
  0.993
Solyc03g112530.2.1
WD-40 repeat family protein / notchless protein, putative (481 aa)
     
 
  0.992
Solyc07g063280.1.1
annotation not available (123 aa)
     
 
  0.992
101261850
Uncharacterized protein; COSII_At2g36930 (120 aa)
     
 
  0.992
Solyc04g074090.2.1
Uncharacterized protein; Binding (892 aa)
     
 
  0.991
Solyc11g066630.1.1
annotation not available (145 aa)
     
 
  0.990
Solyc06g074720.2.1
annotation not available (219 aa)
     
 
  0.990
Solyc01g103740.2.1
annotation not available (504 aa)
     
 
  0.989
Solyc01g103720.2.1
annotation not available (99 aa)
     
 
  0.989
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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