STRINGSTRING
Solyc09g061440.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g061440.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g061440.2.1Uncharacterized protein (223 aa)    
Predicted Functional Partners:
Solyc03g019880.2.1
Uncharacterized protein (123 aa)
   
     
  0.619
Solyc08g008270.2.1
Uncharacterized protein (178 aa)
   
        0.495
Solyc02g067120.2.1
Uncharacterized protein (241 aa)
   
          0.486
Solyc01g087190.2.1
Uncharacterized protein (221 aa)
   
          0.470
Solyc02g062350.2.1
Uncharacterized protein (270 aa)
   
          0.468
Solyc11g065740.1.1
Uncharacterized protein (213 aa)
   
          0.460
Solyc10g081470.1.1
Lutescent 2 (547 aa)
   
          0.451
Solyc01g111750.2.1
Uncharacterized protein (305 aa)
   
          0.433
Solyc04g005090.2.1
Uncharacterized protein (280 aa)
   
          0.425
Solyc04g049130.2.1
Uncharacterized protein (400 aa)
   
          0.421
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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