STRINGSTRING
Solyc09g061680.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g061680.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Solyc09g061680.2.1Uncharacterized protein (314 aa)    
Predicted Functional Partners:
Solyc03g112910.2.1
Uncharacterized protein (901 aa)
         
  0.953
pnk-1
Partially similar to pantothenate kinase family protein (426 aa)
         
  0.932
Solyc09g007130.2.1
3-methyl-2-oxobutanoate hydroxymethyltransferase ; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is tranferred onto alpha-ketoisovalerate to form ketopantoate (351 aa)
 
 
  0.915
GAD2
Glutamate decarboxylase isoform2 (503 aa)
       
    0.903
SlGAD4
Glutamate decarboxylase-like (497 aa)
       
    0.903
Solyc04g025530.2.1
Glutamate decarboxylase (493 aa)
       
    0.903
LOC544313
Glutamate decarboxylase ; Catalyzes the production of GABA. The calmodulin-binding is calcium-dependent and it is proposed that this may, directly or indirectly, form a calcium regulated control of GABA biosynthesis (By similarity) (502 aa)
       
    0.903
GAD3
Glutamate decarboxylase isoform3 (484 aa)
       
    0.903
Solyc08g068190.2.1
Uncharacterized protein (534 aa)
         
  0.902
Solyc06g060250.2.1
Aldehyde dehydrogenase (474 aa)
         
  0.902
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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