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STRINGSTRING
Solyc09g063020.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g063020.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g063020.2.1annotation not available (344 aa)    
Predicted Functional Partners:
101245014
annotation not available (252 aa)
     
 
  0.827
101244586
annotation not available (251 aa)
     
 
  0.827
101266380
annotation not available (268 aa)
       
      0.706
Solyc07g018230.1.1
annotation not available (112 aa)
     
 
  0.685
101268773
annotation not available (278 aa)
     
 
  0.685
101268483
annotation not available (278 aa)
     
 
  0.685
101256736
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (245 aa)
     
 
  0.618
101250531
Uncharacterized protein; Syntaxin of plants 32; Belongs to the syntaxin family (341 aa)
     
   
  0.611
Solyc07g054140.2.1
Uncharacterized protein; Syntaxin of plants 31; Belongs to the syntaxin family (318 aa)
     
   
  0.611
Solyc02g014150.2.1
Uncharacterized protein; Photosystem II stability/assembly factor, chloroplast (HCF136) (377 aa)
           
  0.546
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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