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STRINGSTRING
Solyc09g064310.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g064310.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g064310.2.1annotation not available (257 aa)    
Predicted Functional Partners:
101268452
annotation not available (484 aa)
     
 
  0.934
101249974
annotation not available (386 aa)
     
 
  0.931
Solyc04g010120.2.1
LisH/CRA/RING-U-box domains-containing protein (425 aa)
     
 
  0.910
101250078
ARM repeat superfamily protein (674 aa)
     
 
  0.861
101263084
annotation not available (242 aa)
     
 
  0.819
101262771
annotation not available (190 aa)
     
 
  0.819
Solyc04g080900.2.1
annotation not available (681 aa)
     
 
  0.748
Solyc02g090650.2.1
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- CTLH, C-terminal LisH motif (InterPro-IPR006595); BEST Arabidopsis thaliana protein match is- LisH and RanBPM domains containing protein (TAIR-AT1G61150.1); Has 333 Blast hits to 242 proteins in 88 species- Archae - 0; Ba /.../ - 0; Metazoa - 104; Fungi - 47; Plants - 152; Viruses - 0; Other Eukaryotes - 30 (source- NCBI BLink) (709 aa)
     
 
  0.745
Solyc09g005010.2.1
annotation not available (1001 aa)
           
  0.679
101252662
annotation not available (127 aa)
     
 
  0.667
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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