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STRINGSTRING
Solyc09g064840.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g064840.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g064840.2.1annotation not available (1391 aa)    
Predicted Functional Partners:
101245624
annotation not available (829 aa)
     
 
  0.884
101247472
annotation not available (1846 aa)
     
        0.872
101257890
Ubiquitin-protein ligase 4 (1553 aa)
     
        0.872
Solyc01g111530.2.1
annotation not available (1860 aa)
     
        0.872
101250941
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII) (1642 aa)
     
   
  0.858
101264832
Uncharacterized protein; Embryo defective 2739 (501 aa)
     
        0.854
101256760
annotation not available (703 aa)
           
  0.842
101249869
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (741 aa)
     
        0.823
Solyc02g089970.2.1
Uncharacterized protein; Nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding (1509 aa)
     
      0.746
Solyc04g076580.2.1
Uncharacterized protein; TBP-associated factor 7 (169 aa)
     
        0.746
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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