• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
SlIPT4 protein (Solanum lycopersicum) - STRING interaction network
"SlIPT4" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SlIPT4annotation not available (314 aa)    
Predicted Functional Partners:
SlCYP735A1
annotation not available (516 aa)
         
  0.862
SlCYP735A2
annotation not available (496 aa)
         
  0.862
Solyc06g053690.1.1
annotation not available (106 aa)
   
   
  0.781
101255549
annotation not available (312 aa)
   
   
  0.781
101246797
annotation not available (708 aa)
           
  0.730
SlCKX7
annotation not available (496 aa)
           
  0.730
Solyc07g047770.2.1
Uncharacterized protein; Histidine kinase 2 (1235 aa)
           
  0.730
101247719
Uncharacterized protein; Histidine kinase 3 (1032 aa)
           
  0.730
101244285
annotation not available (251 aa)
           
  0.730
Solyc04g008050.2.1
Uncharacterized protein; Response regulator 14 (654 aa)
           
  0.730
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (8%) [HD]