STRINGSTRING
Solyc09g065130.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g065130.2.1" - Mitochondrial Rho GTPase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g065130.2.1Mitochondrial Rho GTPase (643 aa)    
Predicted Functional Partners:
Solyc02g068340.2.1
Uncharacterized protein (1265 aa)
     
  0.528
Solyc08g068810.2.1
Uncharacterized protein (549 aa)
     
 
    0.524
Solyc08g061830.1.1
Uncharacterized protein (179 aa)
     
 
    0.524
Solyc07g007640.1.1
Uncharacterized protein (237 aa)
     
 
    0.524
Solyc10g055520.1.1
Uncharacterized protein (159 aa)
       
  0.521
Solyc03g033420.2.1
Uncharacterized protein (197 aa)
       
  0.521
Solyc03g093430.2.1
Uncharacterized protein (377 aa)
         
  0.516
Solyc03g114070.2.1
Uncharacterized protein (210 aa)
       
0.514
Solyc12g007210.1.1
Uncharacterized protein (211 aa)
       
0.514
Solyc02g077400.2.1
Uncharacterized protein (197 aa)
       
0.514
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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