STRINGSTRING
Solyc09g065270.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g065270.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g065270.2.1Uncharacterized protein (267 aa)    
Predicted Functional Partners:
Solyc00g026870.1.1
Annotation not available (465 aa)
 
  0.982
Solyc12g014390.1.1
Uncharacterized protein (229 aa)
   
  0.979
Solyc07g062190.2.1
Uncharacterized protein (233 aa)
   
  0.979
Solyc01g087730.2.1
Ribosomal protein (338 aa)
   
  0.978
Solyc11g068820.1.1
Uncharacterized protein (206 aa)
 
  0.975
Solyc11g071320.1.1
Uncharacterized protein (146 aa)
 
  0.974
Solyc08g068220.2.1
Uncharacterized protein (146 aa)
 
  0.974
Solyc06g082760.2.1
Uncharacterized protein (203 aa)
   
  0.972
Solyc06g082750.2.1
Uncharacterized protein (203 aa)
   
  0.972
Solyc09g092090.2.1
Uncharacterized protein (204 aa)
   
  0.967
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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