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Solyc09g065600.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g065600.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g065600.2.1Uncharacterized protein; Golgi nucleotide sugar transporter 4 (126 aa)    
Predicted Functional Partners:
Solyc12g096340.1.1
Uncharacterized protein; UDP-N-acetylglucosamine (UAA) transporter family (298 aa)
     
   
  0.736
101263276
annotation not available (223 aa)
     
   
  0.736
Solyc11g065020.1.1
annotation not available (202 aa)
     
   
  0.736
101261546
annotation not available (344 aa)
     
   
  0.736
101245314
annotation not available (337 aa)
           
  0.693
101260241
annotation not available (340 aa)
           
  0.693
101245830
annotation not available (342 aa)
           
  0.626
101258516
Uncharacterized protein; WUSCHEL related homeobox 13 (274 aa)
           
  0.624
101247415
Uncharacterized protein; Photosystem II reaction center PsbP family protein (266 aa)
           
  0.603
LOC544313
Glutamate decarboxylase; Catalyzes the production of GABA. The calmodulin-binding is calcium-dependent and it is proposed that this may, directly or indirectly, form a calcium regulated control of GABA biosynthesis (By similarity) (502 aa)
           
  0.590
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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