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STRINGSTRING
Solyc09g065610.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g065610.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g065610.1.1annotation not available (58 aa)    
Predicted Functional Partners:
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
   
   
  0.857
Solyc05g050530.2.1
Uncharacterized protein; Pyridoxamine 5’-phosphate oxidase family protein (207 aa)
     
        0.713
Solyc04g010120.2.1
LisH/CRA/RING-U-box domains-containing protein (425 aa)
     
   
  0.569
DAD1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains. Possesses cell death-inhibiting activity (116 aa)
     
   
  0.569
NR
Nitrate reductase [NADH]; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
     
   
  0.556
atg6
Hop-interacting protein THI040 (523 aa)
           
  0.519
101262786
annotation not available (1101 aa)
     
   
  0.482
101257915
annotation not available (1110 aa)
     
   
  0.482
Solyc01g056910.1.1
annotation not available (72 aa)
     
   
  0.482
Solyc06g035680.1.1
annotation not available (178 aa)
     
   
  0.478
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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