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Solyc09g066280.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g066280.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g066280.2.1Uncharacterized protein; Conserved peptide upstream open reading frame 7 (604 aa)    
Predicted Functional Partners:
101257682
Pectinesterase; Pectin lyase-like superfamily protein (389 aa)
           
  0.764
101267731
Uncharacterized protein; Methyltransferases (510 aa)
           
  0.690
101250734
Cox19 family protein (CHCH motif) (72 aa)
           
  0.684
101255858
annotation not available (472 aa)
           
  0.592
101266973
annotation not available (560 aa)
           
  0.530
Solyc06g009180.1.1
annotation not available (533 aa)
           
  0.530
Solyc01g009340.2.1
Uncharacterized protein; IQ-domain 15 (403 aa)
           
  0.521
101257199
annotation not available (1274 aa)
           
  0.516
101258879
annotation not available (1264 aa)
           
  0.516
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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