• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc09g072650.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g072650.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g072650.2.1annotation not available (679 aa)    
Predicted Functional Partners:
Solyc11g043130.1.1
annotation not available (1468 aa)
     
 
  0.787
Solyc11g043120.1.1
annotation not available (517 aa)
     
 
  0.787
101246880
Uncharacterized protein; Embryo sac development arrest 7 (701 aa)
           
  0.687
101263661
Uncharacterized protein; LOCATED IN- chloroplast; EXPRESSED IN- 14 plant structures; EXPRESSED DURING- 8 growth stages; CONTAINS InterPro DOMAIN/s- Hyccin (InterPro-IPR018619); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G64090.1); Has 206 Blast hit /.../06 proteins in 60 species- Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 11 (source- NCBI BLink) (340 aa)
       
 
  0.635
Solyc10g047210.1.1
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- plasma membrane; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Hyccin (InterPro-IPR018619); BEST Arab /.../s thaliana protein match is- unknown protein (TAIR-AT5G21050.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (167 aa)
       
 
  0.635
Solyc03g123530.2.1
Uncharacterized protein; CCAAT-binding factor (1049 aa)
           
  0.632
101267847
annotation not available (300 aa)
     
   
  0.580
101266592
Uncharacterized protein; Allantoate amidohydrolase (493 aa)
           
  0.569
101268735
Armadillo/beta-catenin repeat family protein / kinesin motor family protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (1084 aa)
           
  0.556
Solyc05g010480.2.1
Transducin family protein / WD-40 repeat family protein (396 aa)
           
  0.550
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (10%) [HD]