STRINGSTRING
Solyc09g072810.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g072810.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g072810.2.1Uncharacterized protein (1219 aa)    
Predicted Functional Partners:
Solyc05g018300.2.1
Uncharacterized protein (1080 aa)
     
  0.965
Solyc09g011060.2.1
Clade IV lectin receptor kinase (832 aa)
     
0.828
Solyc10g051340.1.1
Adenylyl cyclase-associated protein (471 aa)
       
  0.749
Solyc01g109580.2.1
Adenylyl cyclase-associated protein (472 aa)
       
  0.749
Solyc07g039550.2.1
Uncharacterized protein (1190 aa)
       
  0.742
Solyc01g110990.2.1
Uncharacterized protein (1111 aa)
       
  0.742
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
     
  0.726
CNOT1
CCR4-NOT transcription complex subunit 1 (2411 aa)
     
  0.702
Solyc09g090660.2.1
Uncharacterized protein (521 aa)
       
  0.694
Solyc10g081370.1.1
Uncharacterized protein ; Probable common Sm protein, is found in U1 and U2 snRNPs and may be part of the spliceosome (88 aa)
       
    0.692
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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