STRINGSTRING
Solyc09g072820.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g072820.2.1" - Cellulose synthase in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g072820.2.1Cellulose synthase (1048 aa)    
Predicted Functional Partners:
Solyc02g072240.2.1
Cellulose synthase (973 aa)
     
 
0.666
Solyc10g006500.2.1
Hexosyltransferase (533 aa)
     
   
  0.543
Solyc07g064050.2.1
Hexosyltransferase (533 aa)
     
   
  0.543
Solyc09g007420.2.1
Uncharacterized protein (370 aa)
     
   
  0.520
Solyc05g005080.2.1
CEL6=CELLULASE 6 (616 aa)
     
 
  0.503
Cel3
Endo-1,4-beta-glucanase (617 aa)
     
 
  0.503
ETR6
Ethylene receptor (754 aa)
   
   
  0.485
THox2
Homeobox 2 protein (310 aa)
     
   
  0.474
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
         
  0.473
Solyc11g069250.1.1
Uncharacterized protein (242 aa)
     
   
  0.470
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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