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Solyc09g072870.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g072870.2.1" - Ribosomal protein L17 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g072870.2.1Ribosomal protein L17 (140 aa)    
Predicted Functional Partners:
101247244
annotation not available (62 aa)
     
 
  0.992
Solyc08g076340.2.1
annotation not available (62 aa)
     
 
  0.992
Solyc11g021130.1.1
annotation not available (285 aa)
   
 
  0.988
Solyc04g049260.1.1
annotation not available (166 aa)
   
 
  0.988
RPL3
Ribosomal protein L3 ; Belongs to the universal ribosomal protein uL3 family (389 aa)
 
 
  0.987
Solyc01g103510.2.1
R-protein L3 B; Belongs to the universal ribosomal protein uL3 family (443 aa)
 
 
  0.987
DDTFR19
60S ribosomal protein L29; Ripening regulated protein DDTFR19 ; Belongs to the eukaryotic ribosomal protein eL29 family (60 aa)
     
 
  0.983
101262068
annotation not available (144 aa)
     
 
  0.979
RPS17
40S ribosomal protein S17 ; Belongs to the eukaryotic ribosomal protein eS17 family (144 aa)
     
 
  0.979
101268656
annotation not available (143 aa)
     
 
  0.978
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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