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STRINGSTRING
101247753 protein (Solanum lycopersicum) - STRING interaction network
"101247753" - F-box family protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101247753F-box family protein (325 aa)    
Predicted Functional Partners:
101250923
annotation not available (272 aa)
           
  0.764
101251195
annotation not available (277 aa)
           
  0.764
101263843
Uncharacterized protein; Stachyose synthase (869 aa)
           
  0.730
phyA
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1123 aa)
           
  0.684
101244884
Uncharacterized protein; Galactose oxidase/kelch repeat superfamily protein (388 aa)
           
  0.653
101260307
F-box family protein (293 aa)
           
  0.653
101262760
Uncharacterized protein; Galactose oxidase/kelch repeat superfamily protein (402 aa)
           
  0.636
101246424
Kelch repeat-containing F-box family protein (370 aa)
     
   
  0.577
Det1
Light-mediated development protein DET1; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5; Belongs to the DET1 family (523 aa)
           
  0.565
Solyc09g064840.2.1
annotation not available (1391 aa)
           
  0.558
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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