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Never-ripe protein (Solanum lycopersicum) - STRING interaction network
"Never-ripe" - Ethylene receptor in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Never-ripeEthylene receptor; Ethylene receptor neverripe (635 aa)    
Predicted Functional Partners:
Solyc01g080540.2.1
Uncharacterized protein (151 aa)
       
 
  0.980
LOC544127
Ethylene-responsive protein kinase Le-CTR1; Ethylene-responsive protein kinase TCTR1 (829 aa)
     
  0.977
CTR3
CTR1-like protein kinase (837 aa)
     
  0.974
CTR4
CTR1-like protein kinase (793 aa)
     
  0.971
EIN2
Ethylene signaling protein (1316 aa)
       
 
  0.897
Solyc02g071220.2.1
Uncharacterized protein (166 aa)
 
 
  0.883
LOC778264
Green ripe-like 1 (243 aa)
       
 
  0.866
Solyc10g079600.1.1
Uncharacterized protein (227 aa)
 
 
  0.856
LOC778262
Green ripe (243 aa)
       
 
  0.840
Solyc00g055950.1.1
Annotation not available (229 aa)
 
  0.818
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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