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STRINGSTRING
101253425 protein (Solanum lycopersicum) - STRING interaction network
"101253425" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101253425annotation not available (829 aa)    
Predicted Functional Partners:
RBR1
Retinoblastoma-related protein 1 (1018 aa)
     
 
  0.930
Solyc12g098160.1.1
annotation not available (1140 aa)
     
 
  0.912
Solyc01g067560.2.1
annotation not available (1209 aa)
     
 
  0.912
101268630
Uncharacterized protein; Ferritin/ribonucleotide reductase-like family protein (329 aa)
     
   
  0.870
101258729
Timeless family protein (1294 aa)
     
   
  0.763
101264796
ARM repeat superfamily protein (1222 aa)
     
        0.757
101262474
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (707 aa)
     
        0.744
101268308
Uncharacterized protein; TRF-like 8 (519 aa)
           
  0.692
101244097
Protein kinase superfamily protein; Belongs to the protein kinase superfamily (430 aa)
           
  0.691
543798
Glycosyl hydrolases family 31 protein; Belongs to the glycosyl hydrolase 31 family (921 aa)
           
  0.691
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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