STRINGSTRING
Solyc09g082500.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g082500.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g082500.2.1Uncharacterized protein (829 aa)    
Predicted Functional Partners:
RBR1
Retinoblastoma-related protein 1 (1018 aa)
     
  0.916
Solyc12g098160.1.1
Uncharacterized protein (1140 aa)
     
  0.916
Solyc01g067560.2.1
Uncharacterized protein (1209 aa)
     
  0.916
Solyc11g020290.1.1
Uncharacterized protein (139 aa)
     
  0.885
Solyc07g039330.2.1
Uncharacterized protein (377 aa)
     
  0.885
Solyc07g039320.2.1
Uncharacterized protein (152 aa)
     
  0.885
Solyc03g121580.2.1
Uncharacterized protein (460 aa)
     
  0.885
Solyc01g111590.2.1
Uncharacterized protein (403 aa)
     
  0.885
MSI1
WD-40 repeat-containing protein MSI1 (424 aa)
     
  0.885
Solyc11g068800.1.1
Uncharacterized protein (449 aa)
     
  0.713
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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