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Solyc09g082790.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g082790.2.1" - DNA repair in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g082790.2.1DNA repair (Rad51) family protein; Belongs to the RecA family (334 aa)    
Predicted Functional Partners:
Solyc12g008680.1.1
Mnd1 family protein (242 aa)
     
 
  0.984
Solyc07g065440.2.1
Spo11/DNA topoisomerase VI, subunit A protein (147 aa)
     
 
  0.968
101261637
recA DNA recombination family protein; Belongs to the RecA family (419 aa)
     
 
  0.965
Solyc06g082320.2.1
Unknown protein; Has 30 Blast hits to 30 proteins in 10 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (255 aa)
           
  0.950
101263336
MUTS-like protein 4 (792 aa)
   
 
  0.919
Solyc02g086580.2.1
Uncharacterized protein; ATP binding;ATP-dependent helicases;DNA helicases (1204 aa)
           
  0.913
MLH1
Uncharacterized protein; MLH1 (728 aa)
   
 
  0.910
Solyc08g081590.1.1
Uncharacterized protein; Sporulation 11-2 (251 aa)
     
 
  0.908
Solyc04g008070.1.1
Cyclin family protein; Belongs to the cyclin family (641 aa)
     
 
  0.908
101267455
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (527 aa)
   
   
  0.860
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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