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GME2 protein (Solanum lycopersicum) - STRING interaction network
"GME2" - GDP-mannose 3',5'-epimerase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GME2GDP-mannose 3’,5’-epimerase (376 aa)    
Predicted Functional Partners:
GMP
GDP-mannose pyrophosphorylase (361 aa)
   
 
  0.974
Solyc06g051270.2.1
Uncharacterized protein (361 aa)
   
 
  0.971
Solyc09g011220.2.1
Uncharacterized protein (361 aa)
   
 
  0.967
Solyc03g118270.1.1
Uncharacterized protein (363 aa)
   
  0.965
Solyc02g084210.1.1
Uncharacterized protein (361 aa)
   
  0.965
Solyc03g113790.2.1
Uncharacterized protein (415 aa)
   
 
  0.964
Solyc06g069550.1.1
UDP-glucose 6-dehydrogenase (480 aa)
   
 
  0.940
Solyc03g115380.1.1
UDP-glucose 6-dehydrogenase (480 aa)
   
 
  0.940
Solyc02g088690.2.1
UDP-glucose 6-dehydrogenase (316 aa)
   
 
  0.940
Solyc02g067080.2.1
UDP-glucose 6-dehydrogenase (509 aa)
   
 
  0.940
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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