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Solyc09g083010.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g083010.2.1" - Bifunctional DNA N-glycoslyase/DNA-(apurinic or apyrimidinic site) lyase in Solanum lycopersicum
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Solyc09g083010.2.1Bifunctional DNA N-glycoslyase/DNA-(apurinic or apyrimidinic site) lyase ; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N- glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines (239 aa)    
Predicted Functional Partners:
Solyc04g016530.2.1
DNA-(apurinic or apyrimidinic site) lyase (539 aa)
     
  0.896
Solyc03g111600.2.1
DNA-(apurinic or apyrimidinic site) lyase (377 aa)
     
  0.896
Solyc03g033530.2.1
Uncharacterized protein (591 aa)
     
  0.896
Solyc06g073400.2.1
Bifunctional DNA N-glycoslyase/DNA-(apurinic or apyrimidinic site) lyase ; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N- glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines (380 aa)
   
   
 
0.802
Solyc03g113880.2.1
Uncharacterized protein (301 aa)
         
    0.800
Solyc08g077800.2.1
Uncharacterized protein (953 aa)
     
 
  0.791
Solyc07g062430.2.1
Uncharacterized protein (343 aa)
       
 
  0.724
Solyc02g067670.2.1
Uncharacterized protein (1539 aa)
   
 
  0.712
Solyc07g008950.2.1
Uncharacterized protein (812 aa)
         
  0.702
Solyc11g008520.1.1
Uncharacterized protein (1428 aa)
   
 
  0.678
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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