STRINGSTRING
Solyc09g083190.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g083190.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g083190.2.1Uncharacterized protein (216 aa)    
Predicted Functional Partners:
Solyc04g054520.2.1
Peptidyl-prolyl cis-trans isomerase (209 aa)
     
   
  0.629
Solyc12g036170.1.1
Uncharacterized protein (173 aa)
     
        0.590
Solyc03g116870.2.1
Uncharacterized protein (463 aa)
     
   
  0.576
Solyc03g062720.2.1
Uncharacterized protein (351 aa)
     
   
  0.498
Solyc06g072500.2.1
Uncharacterized protein (258 aa)
           
  0.483
Solyc12g009600.1.1
Uncharacterized protein (210 aa)
     
        0.473
Solyc05g026550.2.1
Uncharacterized protein (196 aa)
     
   
  0.461
Solyc09g074610.2.1
Uncharacterized protein (250 aa)
     
   
  0.449
Solyc07g022900.2.1
Uncharacterized protein (262 aa)
     
   
  0.444
Solyc06g082970.2.1
Uncharacterized protein (211 aa)
     
   
  0.442
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (17%) [HD]