STRINGSTRING
Solyc09g083270.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g083270.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g083270.2.1Uncharacterized protein (336 aa)    
Predicted Functional Partners:
Solyc11g066630.1.1
Uncharacterized protein (145 aa)
     
        0.728
Solyc06g074720.2.1
Uncharacterized protein (219 aa)
     
        0.728
Solyc01g006170.2.1
Uncharacterized protein (288 aa)
     
        0.728
Solyc01g006090.2.1
Uncharacterized protein (282 aa)
     
        0.728
Solyc06g073120.2.1
Uncharacterized protein (257 aa)
     
        0.724
Solyc06g050820.1.1
Uncharacterized protein (146 aa)
     
        0.721
Solyc02g068420.2.1
Uncharacterized protein (458 aa)
     
        0.721
Solyc02g062620.2.1
Uncharacterized protein (257 aa)
       
      0.704
Solyc09g083080.2.1
Uncharacterized protein (552 aa)
     
      0.650
Solyc05g055880.2.1
Uncharacterized protein (513 aa)
     
      0.650
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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