STRINGSTRING
Solyc09g083420.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g083420.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g083420.2.1Uncharacterized protein (774 aa)    
Predicted Functional Partners:
cdc5
CDC5-like protein (987 aa)
     
      0.983
Solyc09g090660.2.1
Uncharacterized protein (521 aa)
     
 
  0.983
Solyc02g078970.2.1
Uncharacterized protein (570 aa)
     
      0.983
Solyc06g036580.2.1
Uncharacterized protein (633 aa)
     
      0.956
Solyc05g054880.2.1
Uncharacterized protein (549 aa)
     
      0.956
Solyc11g067010.1.1
Uncharacterized protein (117 aa)
     
 
  0.954
Solyc09g009300.2.1
Uncharacterized protein (197 aa)
     
 
  0.954
Solyc08g062920.2.1
Elongation factor 2 (828 aa)
       
 
  0.903
Solyc08g062910.2.1
Elongation factor 2 (770 aa)
       
 
  0.903
Solyc03g117940.2.1
Uncharacterized protein (286 aa)
       
      0.901
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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