STRINGSTRING
LOC544136 protein (Solanum lycopersicum) - STRING interaction network
"LOC544136" - Inorganic phosphate transporter in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC544136Inorganic phosphate transporter (538 aa)    
Predicted Functional Partners:
TPSI1
TPSI1 (58 aa)
           
  0.699
PYD1A
Putative dehydrogenase (429 aa)
           
  0.692
Solyc05g013510.2.1
Phosphate transporter ; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport (577 aa)
       
 
  0.624
Solyc02g082410.2.1
Uncharacterized protein (707 aa)
   
     
  0.513
Solyc11g040120.1.1
DNA helicase (860 aa)
           
  0.483
Solyc07g005020.2.1
DNA helicase (737 aa)
           
  0.482
Solyc02g082180.2.1
DNA helicase (834 aa)
           
  0.482
Solyc02g070780.2.1
DNA helicase (787 aa)
           
  0.482
Solyc01g110130.2.1
DNA helicase (831 aa)
           
  0.482
Solyc01g079500.2.1
DNA helicase (718 aa)
           
  0.482
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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