STRINGSTRING
Solyc09g090120.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g090120.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g090120.2.1Uncharacterized protein (157 aa)    
Predicted Functional Partners:
Solyc11g013520.1.1
Uncharacterized protein (447 aa)
       
  0.969
Solyc10g078520.1.1
PHD finger protein ING (258 aa)
     
  0.954
Solyc09g091190.2.1
PHD finger protein ING (236 aa)
     
  0.954
Solyc01g079210.2.1
Uncharacterized protein (451 aa)
     
  0.950
Solyc07g053190.2.1
Enhancer of polycomb-like protein (790 aa)
       
  0.943
Solyc02g081650.2.1
Enhancer of polycomb-like protein (447 aa)
       
  0.943
Solyc02g032300.2.1
Enhancer of polycomb-like protein (446 aa)
       
  0.943
Solyc04g078400.2.1
Uncharacterized protein (298 aa)
     
  0.940
Solyc02g092910.2.1
Uncharacterized protein (317 aa)
     
  0.940
Solyc04g077290.1.1
Uncharacterized protein (274 aa)
     
  0.920
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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