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HrBP1 protein (Solanum lycopersicum) - STRING interaction network
"HrBP1" - Harpin binding protein 1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HrBP1Harpin binding protein 1 (276 aa)    
Predicted Functional Partners:
MFP1
MAR-binding filament-like protein 1 ; Binds DNA. Interacts with chromatin via matrix attachment regions (MARs). Likely to participate in nuclear architecture by connecting chromatin with the nuclear matrix and potentially with the nuclear envelope (717 aa)
           
  0.699
TCTP
Translationally-controlled tumor protein homolog ; Involved in calcium binding and microtubule stabilization (168 aa)
           
  0.695
ChrC
Plastid lipid associated protein CHRC (326 aa)
   
   
  0.661
Solyc08g068570.2.1
Uncharacterized protein (498 aa)
   
   
  0.628
Solyc02g072160.2.1
Uncharacterized protein (577 aa)
   
        0.547
Solyc10g011770.2.1
Uncharacterized protein (169 aa)
   
        0.529
Solyc01g095430.2.1
Uncharacterized protein (170 aa)
   
        0.526
Solyc08g076480.2.1
Uncharacterized protein (344 aa)
   
   
  0.521
Solyc01g098640.2.1
Uncharacterized protein (289 aa)
   
        0.520
Solyc05g006440.2.1
Uncharacterized protein (197 aa)
   
        0.519
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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