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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc09g090400.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g090400.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g090400.2.1annotation not available (385 aa)    
Predicted Functional Partners:
101257451
annotation not available (344 aa)
     
  0.981
101261101
annotation not available (409 aa)
   
 
0.980
101265995
Uncharacterized protein; Transferases;nucleotidyltransferases (461 aa)
     
 
  0.968
101251037
annotation not available (732 aa)
     
 
  0.968
Solyc06g082580.2.1
annotation not available (303 aa)
     
  0.965
101262400
annotation not available (464 aa)
     
  0.944
101244374
annotation not available (477 aa)
     
  0.944
Solyc01g066690.2.1
annotation not available (503 aa)
     
  0.944
101263957
annotation not available (637 aa)
   
 
0.916
101261788
Uncharacterized protein; NagB/RpiA/CoA transferase-like superfamily protein; Belongs to the eIF-2B alpha/beta/delta subunits family (620 aa)
   
 
0.916
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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