STRINGSTRING
Solyc09g090420.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g090420.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g090420.2.1Uncharacterized protein (1105 aa)    
Predicted Functional Partners:
Solyc11g066830.1.1
Uncharacterized protein (309 aa)
     
  0.994
Solyc09g090660.2.1
Uncharacterized protein (521 aa)
     
  0.977
Solyc05g052000.2.1
Uncharacterized protein (219 aa)
     
  0.974
Solyc03g093350.2.1
Uncharacterized protein (723 aa)
     
  0.974
Solyc01g006010.2.1
Uncharacterized protein (803 aa)
     
  0.974
Solyc10g083640.1.1
Uncharacterized protein (350 aa)
     
  0.974
Solyc01g103090.2.1
Uncharacterized protein (785 aa)
     
  0.974
cdc5
CDC5-like protein (987 aa)
     
  0.973
Solyc10g081290.1.1
Uncharacterized protein (207 aa)
     
  0.971
Solyc10g081090.1.1
Uncharacterized protein (127 aa)
     
  0.971
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (19%) [HD]