STRINGSTRING
Solyc09g090510.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g090510.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g090510.2.1Uncharacterized protein (862 aa)    
Predicted Functional Partners:
Solyc05g053950.2.1
Uncharacterized protein (319 aa)
 
   
  0.756
Solyc03g119700.2.1
Uncharacterized protein (159 aa)
       
 
  0.715
Solyc02g063390.2.1
Uncharacterized protein (318 aa)
 
        0.644
Solyc01g005320.2.1
Uncharacterized protein (322 aa)
 
        0.634
Solyc03g118830.2.1
Uncharacterized protein (304 aa)
 
        0.626
Solyc12g100280.1.1
Uncharacterized protein (129 aa)
         
  0.619
Solyc12g100220.1.1
Uncharacterized protein (271 aa)
         
  0.619
Solyc12g056710.1.1
Uncharacterized protein (283 aa)
         
  0.619
Solyc12g056700.1.1
Uncharacterized protein (309 aa)
         
  0.619
Solyc12g056610.1.1
Uncharacterized protein (246 aa)
         
  0.619
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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