• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101263464 protein (Solanum lycopersicum) - STRING interaction network
"101263464" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101263464annotation not available (521 aa)    
Predicted Functional Partners:
Solyc07g007210.2.1
annotation not available (925 aa)
     
 
  0.998
101260491
annotation not available (88 aa)
     
 
  0.998
101246377
annotation not available (109 aa)
     
 
  0.996
Solyc09g010620.1.1
annotation not available (163 aa)
   
 
  0.996
Solyc03g119010.2.1
Uncharacterized protein; Modifier of snc1,4 (240 aa)
     
 
  0.996
Solyc05g051070.2.1
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Isy1-like splicing (InterPro-IPR009360); H /.../7 Blast hits to 965 proteins in 236 species- Archae - 12; Bacteria - 13; Metazoa - 351; Fungi - 230; Plants - 49; Viruses - 9; Other Eukaryotes - 483 (source- NCBI BLink) (310 aa)
     
 
  0.995
cdc5
CDC5-like protein (987 aa)
     
 
  0.995
Y14
RNA-binding protein 8A; RNA-binding (RRM/RBD/RNP motifs) family protein (195 aa)
     
 
  0.995
101254575
Uncharacterized protein; Splicing factor-related (509 aa)
     
 
  0.993
101261183
Uncharacterized protein; Cleavage and polyadenylation specificity factor (CPSF) A subunit protein (1393 aa)
     
 
  0.993
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (12%) [HD]