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TSI-1 protein (Solanum lycopersicum) - STRING interaction network
TSI-1 protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSI-1TSI-1 protein (160 aa)    
Predicted Functional Partners:
LOC544043
Pathogenesis-related genes transcriptional activator PTI6 ; Acts as a transcriptional activator. Binds to the GCC- box pathogenesis-related promoter element. Activates the defense genes of plants (248 aa)
           
  0.824
LOC544042
Pathogenesis-related genes transcriptional activator PTI5 ; Acts as a transcriptional activator. Binds to the GCC- box pathogenesis-related promoter element. Activates plants defense genes. Can confer resistance to Pseudomonas syringae tomato by potentiating the transcription of a set of pathogenesis related genes, downstream to a defense signaling pathway involving PTO and PRF, but probably independent of ethylene, jasmonate and salicylic acid (161 aa)
           
  0.706
pto
Pto kinase; Serine/threonine protein kinase Pto (311 aa)
           
  0.697
JERF1
Transcription factor JERF1 (372 aa)
           
  0.693
EREB
Transcription factor TSRF1 (240 aa)
           
  0.691
TERF1
Ethylene response factor; Ethylene-responsive factor 1 (224 aa)
           
  0.690
ERF2
Ethylene responsive factor 2; Ethylene-binding protein (260 aa)
           
  0.520
PR-5
PR-5x (226 aa)
           
  0.465
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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