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STRINGSTRING
RBR1 protein (Solanum lycopersicum) - STRING interaction network
"RBR1" - Retinoblastoma-related protein 1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBR1Retinoblastoma-related protein 1 (1018 aa)    
Predicted Functional Partners:
101267947
Uncharacterized protein; Transcription factor DP (354 aa)
     
 
  0.997
Solyc09g010670.2.1
Uncharacterized protein; Transcription factor DP (195 aa)
     
 
  0.996
101248386
Uncharacterized protein; Winged-helix DNA-binding transcription factor family protein (397 aa)
     
 
  0.988
101256302
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (737 aa)
     
 
  0.973
Solyc12g098160.1.1
annotation not available (1140 aa)
     
 
  0.971
Solyc01g067560.2.1
annotation not available (1209 aa)
     
 
  0.971
MSI1
WD-40 repeat-containing protein MSI1 (424 aa)
     
 
  0.968
101244053
annotation not available (449 aa)
     
 
  0.963
Solyc06g074010.2.1
annotation not available (847 aa)
     
 
  0.963
101259362
Uncharacterized protein; E2F transcription factor 3 (479 aa)
     
 
  0.963
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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