STRINGSTRING
Solyc09g091500.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g091500.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g091500.2.1Uncharacterized protein (88 aa)    
Predicted Functional Partners:
Solyc11g005370.1.1
Uncharacterized protein (97 aa)
     
  0.999
Solyc09g009640.2.1
Uncharacterized protein (99 aa)
     
  0.999
Solyc06g073700.2.1
Uncharacterized protein (98 aa)
     
  0.999
Solyc10g078450.1.1
Uncharacterized protein (44 aa)
     
  0.999
Solyc06g084350.2.1
Uncharacterized protein (93 aa)
     
  0.998
Solyc01g099740.2.1
Uncharacterized protein (151 aa)
     
  0.997
Solyc10g081370.1.1
Uncharacterized protein ; Probable common Sm protein, is found in U1 and U2 snRNPs and may be part of the spliceosome (88 aa)
     
  0.996
Solyc11g006820.1.1
Uncharacterized protein (81 aa)
     
  0.993
Solyc05g055260.2.1
Uncharacterized protein (80 aa)
     
  0.993
Solyc09g072970.2.1
Uncharacterized protein (93 aa)
     
  0.990
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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