• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc09g092420.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g092420.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g092420.1.1annotation not available (285 aa)    
Predicted Functional Partners:
cdc5
CDC5-like protein (987 aa)
       
      0.578
Solyc12g036670.1.1
annotation not available (247 aa)
         
  0.531
101263662
annotation not available (508 aa)
         
  0.531
Solyc01g105540.2.1
annotation not available (570 aa)
         
  0.531
101267094
Uncharacterized protein; Cationic amino acid transporter 8 (617 aa)
   
 
  0.493
Solyc02g070280.2.1
annotation not available (532 aa)
   
 
  0.491
101245518
annotation not available (584 aa)
   
 
  0.490
101262779
annotation not available (596 aa)
   
 
  0.490
101244565
annotation not available (599 aa)
   
 
  0.488
Solyc02g037510.2.1
Uncharacterized protein; Cationic amino acid transporter 4 (598 aa)
   
 
  0.488
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (12%) [HD]