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BR1 protein (Solanum lycopersicum) - STRING interaction network
"BR1" - Xyloglucan endotransglucosylase/hydrolase in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
BR1Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues; Belongs to the glycosyl hydrolase 16 family (276 aa)    
Predicted Functional Partners:
PMEU1
Pectinesterase/pectinesterase inhibitor U1; Acts in the modification of cell walls via demethylesterification of cell wall pectin; In the C-terminal section; belongs to the pectinesterase family (583 aa)
           
  0.730
101256674
RING-type E3 ubiquitin transferase; Armadillo/beta-catenin-like repeat family protein (1046 aa)
           
  0.716
PGcat
Uncharacterized protein; Polygalacturonase (397 aa)
           
  0.681
TPG6
Polygalacturonase (395 aa)
     
   
  0.640
PS-2
Dehiscence polygalacturonase (392 aa)
           
  0.630
XOPG1
Polygalacturonase (452 aa)
           
  0.624
cel7
Endoglucanase; Endo-1,4-beta-D-glucanase (479 aa)
           
  0.539
101254639
annotation not available (451 aa)
     
   
  0.491
101263458
annotation not available (439 aa)
     
   
  0.491
101244298
annotation not available (434 aa)
     
   
  0.491
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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