STRINGSTRING
Solyc09g092530.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g092530.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g092530.2.1Uncharacterized protein (263 aa)    
Predicted Functional Partners:
Solyc08g076480.2.1
Uncharacterized protein (344 aa)
   
          0.467
Solyc05g043320.1.1
Uncharacterized protein (228 aa)
   
          0.449
Solyc04g009370.2.1
Uncharacterized protein (243 aa)
   
          0.446
Solyc01g079470.2.1
Uncharacterized protein (124 aa)
   
          0.429
Solyc11g051060.1.1
Uncharacterized protein (360 aa)
   
          0.420
Solyc12g049550.1.1
Uncharacterized protein (365 aa)
   
          0.419
Solyc06g009630.1.1
Uncharacterized protein (127 aa)
   
          0.415
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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