STRINGSTRING
Solyc09g098000.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g098000.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g098000.2.1Uncharacterized protein (349 aa)    
Predicted Functional Partners:
Solyc12g010010.1.1
Uncharacterized protein (692 aa)
       
  0.591
LKT1
Potassium channel (883 aa)
       
  0.591
Solyc12g005400.1.1
Uncharacterized protein (686 aa)
       
  0.591
Solyc11g069580.1.1
Uncharacterized protein (707 aa)
       
  0.591
Solyc11g011500.1.1
Uncharacterized protein (829 aa)
       
  0.591
Solyc10g024360.1.1
Uncharacterized protein (841 aa)
       
  0.591
Solyc10g006800.2.1
Uncharacterized protein (628 aa)
       
  0.591
Solyc09g007840.2.1
Uncharacterized protein (712 aa)
       
  0.591
Solyc09g005220.1.1
Uncharacterized protein (286 aa)
       
  0.591
Solyc08g069140.2.1
Uncharacterized protein (726 aa)
       
  0.591
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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