STRINGSTRING
Solyc09g098230.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g098230.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g098230.2.1Uncharacterized protein (624 aa)    
Predicted Functional Partners:
Solyc01g091350.2.1
ATP-dependent DNA helicase 2 subunit KU80 ; Single-stranded DNA-dependent ATP-dependent helicase (709 aa)
     
  0.990
Solyc01g091430.1.1
Uncharacterized protein (126 aa)
     
  0.988
Solyc09g009340.1.1
Uncharacterized protein (731 aa)
     
  0.979
Solyc05g053800.2.1
Uncharacterized protein (1316 aa)
     
  0.978
Solyc07g005880.2.1
Uncharacterized protein (1012 aa)
     
 
  0.969
Solyc01g111870.1.1
Uncharacterized protein (2728 aa)
       
  0.961
Solyc07g062430.2.1
Uncharacterized protein (343 aa)
     
  0.960
Solyc07g042790.1.1
Uncharacterized protein (1452 aa)
     
 
  0.956
Solyc06g034070.1.1
Uncharacterized protein (1557 aa)
     
 
  0.956
Solyc09g018710.2.1
Uncharacterized protein (410 aa)
     
 
  0.946
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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