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STRINGSTRING
101260670 protein (Solanum lycopersicum) - STRING interaction network
"101260670" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101260670Uncharacterized protein; KU70 homolog (624 aa)    
Predicted Functional Partners:
Solyc01g091430.1.1
annotation not available (126 aa)
     
 
  0.994
101253129
ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase (709 aa)
     
 
  0.994
Solyc01g091440.2.1
annotation not available (73 aa)
     
 
  0.987
101256382
DNA repair-recombination protein (RAD50) (1316 aa)
     
 
  0.982
101264663
DNA repair and meiosis protein (Mre11); Belongs to the MRE11/RAD32 family (731 aa)
     
 
  0.981
101265192
Uncharacterized protein; RADIATION SENSITIVE 17 (599 aa)
     
 
  0.973
Solyc07g062430.2.1
Uncharacterized protein; Phosphoesterase (343 aa)
     
 
  0.971
101246064
BRCT domain-containing DNA repair protein (384 aa)
     
 
  0.966
Solyc02g091120.2.1
DNA LIGASE 6 (1473 aa)
     
 
  0.966
101247901
poly(ADP-ribose) polymerase 2 (992 aa)
     
 
  0.961
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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