STRINGSTRING
Solyc09g098370.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g098370.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g098370.2.1Uncharacterized protein (991 aa)    
Predicted Functional Partners:
Solyc01g068350.2.1
Uncharacterized protein (214 aa)
     
  0.833
Solyc01g068340.2.1
Uncharacterized protein (515 aa)
     
  0.833
Solyc08g077800.2.1
Uncharacterized protein (953 aa)
     
  0.703
Solyc11g020760.1.1
Uncharacterized protein (488 aa)
     
 
  0.649
Solyc11g020750.1.1
Uncharacterized protein (294 aa)
     
 
  0.576
Solyc02g091120.2.1
DNA ligase (1473 aa)
     
  0.517
Solyc11g066790.1.1
Uncharacterized protein (1071 aa)
     
   
  0.475
Solyc08g067250.2.1
Uncharacterized protein (770 aa)
     
  0.409
Solyc01g097110.1.1
Uncharacterized protein (1500 aa)
     
  0.407
Solyc11g006010.1.1
Uncharacterized protein (580 aa)
     
  0.400
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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