STRINGSTRING
Solyc09g098450.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g098450.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g098450.2.1Uncharacterized protein (789 aa)    
Predicted Functional Partners:
Solyc08g081990.2.1
Uncharacterized protein (1052 aa)
     
   
  0.709
Solyc05g054260.2.1
Kinesin-like protein (808 aa)
     
   
  0.699
Solyc12g049500.1.1
Uncharacterized protein (508 aa)
           
  0.699
Solyc11g069690.1.1
Uncharacterized protein (125 aa)
           
  0.699
Solyc09g091070.1.1
Malate dehydrogenase (298 aa)
           
  0.699
Solyc09g090940.2.1
Uncharacterized protein (468 aa)
           
  0.699
Solyc08g061260.2.1
Uncharacterized protein (322 aa)
           
  0.699
Solyc07g006030.2.1
Uncharacterized protein (1861 aa)
           
  0.699
Solyc05g051900.2.1
Uncharacterized protein (483 aa)
           
  0.699
Solyc02g084920.2.1
Proteasome subunit beta type ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (223 aa)
           
  0.699
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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