STRINGSTRING
Solyc10g005050.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g005050.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g005050.2.1Uncharacterized protein (180 aa)    
Predicted Functional Partners:
Solyc01g098640.2.1
Uncharacterized protein (289 aa)
   
        0.656
Solyc04g011900.2.1
Uncharacterized protein (330 aa)
   
        0.520
Solyc07g054820.2.1
Uncharacterized protein (250 aa)
   
        0.519
Solyc06g082940.2.1
Uncharacterized protein (220 aa)
   
 
  0.502
Solyc06g082950.2.1
Uncharacterized protein (220 aa)
   
 
  0.499
Solyc01g109330.2.1
Uncharacterized protein (459 aa)
   
        0.480
Solyc02g069460.2.1
Uncharacterized protein (228 aa)
   
        0.477
Solyc02g069450.2.1
Uncharacterized protein (246 aa)
   
        0.475
Solyc03g034170.2.1
Uncharacterized protein (285 aa)
   
        0.475
Solyc08g042140.2.1
Uncharacterized protein (305 aa)
   
          0.460
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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