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STRINGSTRING
101257607 protein (Solanum lycopersicum) - STRING interaction network
"101257607" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101257607annotation not available (402 aa)    
Predicted Functional Partners:
101249096
Mitochondrial 28S ribosomal protein S29-related (452 aa)
     
   
  0.748
101259522
Uncharacterized protein; Pentatricopeptide repeat (PPR) superfamily protein (522 aa)
     
   
0.720
Solyc08g075720.1.1
Ribosomal L18p/L5e family protein (156 aa)
     
   
  0.705
101252028
Temperature sensing protein-related (336 aa)
     
   
  0.669
101259181
annotation not available (217 aa)
     
   
  0.666
101244583
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (617 aa)
     
   
  0.658
101246827
Uncharacterized protein; Pentatricopeptide repeat (PPR) superfamily protein (520 aa)
     
   
  0.655
101249838
DEA(D/H)-box RNA helicase family protein (754 aa)
     
 
  0.649
Solyc10g074990.1.1
Uncharacterized protein; Polynucleotidyl transferase, ribonuclease H-like superfamily protein (104 aa)
           
  0.634
101258700
RNA-binding CRS1 / YhbY (CRM) domain protein (375 aa)
           
  0.634
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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