STRINGSTRING
Solyc10g005470.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g005470.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g005470.2.1Uncharacterized protein (139 aa)    
Predicted Functional Partners:
Solyc06g036030.1.1
Uncharacterized protein (132 aa)
   
          0.527
Solyc02g090020.2.1
Uncharacterized protein (248 aa)
   
        0.525
Solyc04g009420.2.1
Uncharacterized protein (244 aa)
   
        0.508
Solyc03g098110.2.1
Uncharacterized protein (385 aa)
   
          0.508
Solyc01g087190.2.1
Uncharacterized protein (221 aa)
   
          0.502
Solyc03g019880.2.1
Uncharacterized protein (123 aa)
   
          0.493
Solyc06g084470.2.1
Uncharacterized protein (172 aa)
   
        0.491
Solyc05g013480.2.1
Uncharacterized protein (353 aa)
   
          0.489
Solyc05g006440.2.1
Uncharacterized protein (197 aa)
   
        0.487
Solyc02g072460.1.1
Uncharacterized protein (154 aa)
   
        0.486
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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