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Solyc10g005510.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g005510.2.1" - Glyceraldehyde-3-phosphate dehydrogenase in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g005510.2.1Glyceraldehyde-3-phosphate dehydrogenase (419 aa)    
Predicted Functional Partners:
Solyc09g008130.2.1
Phosphoglycerate kinase (683 aa)
   
  0.999
Solyc07g066610.2.1
Phosphoglycerate kinase (482 aa)
   
  0.998
Solyc07g066600.2.1
Phosphoglycerate kinase (401 aa)
   
  0.998
Solyc10g054870.1.1
Uncharacterized protein (312 aa)
 
  0.996
Solyc06g005490.2.1
Uncharacterized protein (257 aa)
 
  0.996
Solyc04g011510.2.1
Uncharacterized protein (259 aa)
 
  0.996
Solyc01g111120.2.1
Uncharacterized protein (326 aa)
 
  0.996
Solyc10g018300.1.1
Uncharacterized protein (741 aa)
   
  0.981
Solyc05g050970.2.1
Uncharacterized protein (774 aa)
   
  0.981
Solyc01g018020.1.1
Uncharacterized protein (787 aa)
   
  0.981
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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