STRINGSTRING
Solyc10g005540.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g005540.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g005540.2.1Uncharacterized protein (264 aa)    
Predicted Functional Partners:
Solyc04g074150.1.1
Uncharacterized protein (115 aa)
     
 
  0.910
Solyc01g103950.2.1
Uncharacterized protein (553 aa)
         
  0.636
Solyc05g012090.2.1
Dihydropterin pyrophosphokinase-dihydropteroate synthase (512 aa)
   
 
  0.482
Solyc09g008130.2.1
Phosphoglycerate kinase (683 aa)
   
   
  0.476
Solyc06g073470.2.1
Uncharacterized protein (376 aa)
   
   
  0.457
Solyc10g080080.1.1
Thioredoxin reductase (543 aa)
   
   
  0.446
Solyc11g040390.1.1
Uncharacterized protein (819 aa)
       
  0.440
Solyc06g064550.2.1
Uncharacterized protein (919 aa)
       
  0.440
Solyc04g016010.2.1
Uncharacterized protein (537 aa)
   
   
  0.438
Solyc12g099800.1.1
Uncharacterized protein (303 aa)
   
   
  0.433
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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