STRINGSTRING
Solyc10g005830.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g005830.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g005830.2.1Uncharacterized protein (254 aa)    
Predicted Functional Partners:
tm-1^GCR26
Tm-1 protein (754 aa)
     
        0.613
Solyc06g036030.1.1
Uncharacterized protein (132 aa)
   
          0.514
Solyc02g090020.2.1
Uncharacterized protein (248 aa)
   
        0.495
Solyc10g061980.1.1
Uncharacterized protein (148 aa)
   
          0.486
Solyc10g005470.2.1
Uncharacterized protein (139 aa)
   
          0.485
Solyc05g050110.2.1
Uncharacterized protein (259 aa)
   
          0.469
Solyc03g019880.2.1
Uncharacterized protein (123 aa)
   
          0.464
Solyc01g095270.2.1
Uncharacterized protein (292 aa)
   
          0.463
Solyc00g021660.1.1
Annotation not available (74 aa)
   
          0.449
Solyc02g067120.2.1
Uncharacterized protein (241 aa)
   
          0.443
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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