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101266566 protein (Solanum lycopersicum) - STRING interaction network
"101266566" - FKBP-like peptidyl-prolyl cis-trans isomerase family protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101266566FKBP-like peptidyl-prolyl cis-trans isomerase family protein (213 aa)    
Predicted Functional Partners:
101263184
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly (329 aa)
     
 
  0.908
Solyc10g083600.1.1
Ribosomal RNA processing Brix domain protein (337 aa)
     
      0.884
101259142
annotation not available (312 aa)
     
      0.862
101250547
annotation not available (553 aa)
     
      0.857
101266558
Uncharacterized protein; Pumilio 24 (620 aa)
     
      0.856
101265348
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- rRNA processing; LOCATED IN- preribosome, small subunit precursor; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Nucleolar, Nop52 (InterPro-I /.../01); Has 543 Blast hits to 530 proteins in 201 species- Archae - 0; Bacteria - 10; Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other Eukaryotes - 112 (source- NCBI BLink) (589 aa)
     
      0.855
101257580
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (603 aa)
     
      0.853
101268074
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (155 aa)
     
      0.852
101261490
annotation not available (314 aa)
     
      0.851
Solyc11g066280.1.1
Ribosomal RNA processing Brix domain protein (335 aa)
     
      0.849
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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