STRINGSTRING
Solyc10g005880.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g005880.2.1" - Uridine kinase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g005880.2.1Uridine kinase (422 aa)    
Predicted Functional Partners:
Solyc07g021750.1.1
Cytidine deaminase (326 aa)
   
 
  0.985
Solyc02g067880.1.1
Uridine kinase (445 aa)
 
0.983
Solyc06g065580.2.1
Uridine kinase (483 aa)
 
0.983
Solyc07g065890.2.1
Uridine kinase (446 aa)
 
0.982
Solyc09g011300.2.1
Uncharacterized protein (286 aa)
 
0.982
Solyc03g078080.2.1
Uncharacterized protein (326 aa)
   
 
  0.979
Solyc11g068830.1.1
Uncharacterized protein (477 aa)
   
  0.976
Solyc10g083420.1.1
Uncharacterized protein (152 aa)
     
  0.962
Solyc09g009690.2.1
Uncharacterized protein (334 aa)
     
  0.962
Solyc08g077300.2.1
Uridine monophosphate/cytidine monophosphate kinase ; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors (216 aa)
   
  0.958
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (9%) [HD]